STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_01539Uncharacterized protein. (1319 aa)    
Predicted Functional Partners:
PMG11_08883
Putative AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.923
PMG11_00488
Uncharacterized protein.
   
 0.872
PMG11_06443
CBF domain-containing protein.
   
  0.854
PMG11_04003
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.851
PMG11_06926
Putative Function: RRP5 is required for formation of both 18S and 5. 8S rRNA in yeast.
  
 0.849
PMG11_01975
Putative WD repeat-containing protein 5B.
    
 0.844
utp7
Putative U3 small nucleolar RNA-associated protein 7.
   
 0.827
PMG11_03496
Sas10 domain-containing protein.
   
 0.822
PMG11_05883
Putative mRNA splicing protein.
    
 0.821
PMG11_10350
DRIM domain-containing protein.
   
  0.821
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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