STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_02579But2 domain-containing protein. (327 aa)    
Predicted Functional Partners:
PEBR_20537
Putative SWI-SNF chromatin remodeling complex, Snf5 subunit.
    
 0.804
PMG11_10703
Putative Chromatin remodeling factor subunit and related transcription factors.
    
 0.761
PMG11_10939
Putative ARP4; Belongs to the actin family.
    
 0.761
PMG11_00758
Putative SWI-SNF complex subunit (BAF60b).
    
 0.759
PMG11_06840
Uncharacterized protein.
    
 0.691
PMG11_02902
Putative SWIB/MDM2 domain protein (AFU_orthologue AFUA_1G02020).
    
 0.687
PMG11_05534
Uncharacterized protein.
    
 0.683
PMG11_03239
Bromo domain-containing protein.
    
 0.683
PMG11_01839
Uncharacterized protein.
    
 0.639
PMG11_08775
Uncharacterized protein.
    
 0.639
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.