STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_02563Putative Ubiquitin. (154 aa)    
Predicted Functional Partners:
PMG11_05326
ANK_REP_REGION domain-containing protein.
   
 0.997
PMG11_05566
Putative ZZ type zinc finger domain containing protein.
   
 0.996
PMG11_00574
Putative 40S ribosomal protein S19.
   
 0.995
RPS2
Putative 40S ribosomal protein S2/30S ribosomal protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.995
PMG11_00518
Putative ZYBA0S16-00628g1_1.
  
0.995
PMG11_00611
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.995
PEBR_28884
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.995
RPS24B
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.995
PMG11_01681
Putative 60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 0.995
rps20
Putative 40S ribosomal protein S10a.
   
 0.995
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.