STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_06532Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (254 aa)    
Predicted Functional Partners:
PEBR_12639
Putative Ribose 5-phosphate isomerase A.
  
 0.975
PMG11_10630
Putative D-xylulokinase.
    
 0.963
PMG11_04058
Putative Thiamin diphosphate-binding fold (THDP-binding).
 
 0.959
PMG11_07688
Putative Dihydroxyacetone synthase.
  
 0.958
PMG11_09787
Putative Transketolase.
  
 0.958
PMG11_05189
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 0.956
PMG11_05233
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 0.956
PEBR_23211
Putative ribose 5-phosphate isomerase.
  
 
 0.951
PMG11_09582
Uncharacterized protein.
  
 0.937
PMG11_09043
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.913
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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