Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PMG11_01682 | PMG11_01863 | A0A0F7THM7 | A0A0F7TKR6 | Putative Small nuclear ribonucleoprotein-associated protein B. | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | 0.964 |
PMG11_01682 | PMG11_02055 | A0A0F7THM7 | A0A0F7TG70 | Putative Small nuclear ribonucleoprotein-associated protein B. | Putative Pre-mRNA processing splicing factor 8. | 0.991 |
PMG11_01682 | PMG11_02496 | A0A0F7THM7 | A0A0F7THM6 | Putative Small nuclear ribonucleoprotein-associated protein B. | Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. | 0.963 |
PMG11_01682 | PMG11_02856 | A0A0F7THM7 | A0A0F7TMK6 | Putative Small nuclear ribonucleoprotein-associated protein B. | Putative Function: CD2BP of H. sapiens binds a cytoplamic region of CD2. | 0.921 |
PMG11_01682 | PMG11_03246 | A0A0F7THM7 | A0A0F7V9M6 | Putative Small nuclear ribonucleoprotein-associated protein B. | Putative Elongation factor 2. | 0.993 |
PMG11_01682 | PMG11_06268 | A0A0F7THM7 | A0A0F7TLT1 | Putative Small nuclear ribonucleoprotein-associated protein B. | Putative RNA-dependent ATPase RNA helicase. | 0.992 |
PMG11_01682 | PMG11_07857 | A0A0F7THM7 | A0A0F7TTS9 | Putative Small nuclear ribonucleoprotein-associated protein B. | Uncharacterized protein. | 0.727 |
PMG11_01682 | PMG11_09324 | A0A0F7THM7 | A0A0F7U0F9 | Putative Small nuclear ribonucleoprotein-associated protein B. | Putative U4/U6.U5 snRNP associated protein. | 0.966 |
PMG11_01682 | PMG11_10945 | A0A0F7THM7 | A0A0F7U508 | Putative Small nuclear ribonucleoprotein-associated protein B. | Putative Pre-mRNA splicing factor prp1. | 0.990 |
PMG11_01682 | snrpe | A0A0F7THM7 | A0A0F7TDQ0 | Putative Small nuclear ribonucleoprotein-associated protein B. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
PMG11_01863 | PMG11_01682 | A0A0F7TKR6 | A0A0F7THM7 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Putative Small nuclear ribonucleoprotein-associated protein B. | 0.964 |
PMG11_01863 | PMG11_02055 | A0A0F7TKR6 | A0A0F7TG70 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Putative Pre-mRNA processing splicing factor 8. | 0.999 |
PMG11_01863 | PMG11_02496 | A0A0F7TKR6 | A0A0F7THM6 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. | 0.998 |
PMG11_01863 | PMG11_02856 | A0A0F7TKR6 | A0A0F7TMK6 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Putative Function: CD2BP of H. sapiens binds a cytoplamic region of CD2. | 0.949 |
PMG11_01863 | PMG11_03246 | A0A0F7TKR6 | A0A0F7V9M6 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Putative Elongation factor 2. | 0.999 |
PMG11_01863 | PMG11_06268 | A0A0F7TKR6 | A0A0F7TLT1 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Putative RNA-dependent ATPase RNA helicase. | 0.985 |
PMG11_01863 | PMG11_07857 | A0A0F7TKR6 | A0A0F7TTS9 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.841 |
PMG11_01863 | PMG11_09324 | A0A0F7TKR6 | A0A0F7U0F9 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Putative U4/U6.U5 snRNP associated protein. | 0.973 |
PMG11_01863 | PMG11_10945 | A0A0F7TKR6 | A0A0F7U508 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Putative Pre-mRNA splicing factor prp1. | 0.999 |
PMG11_01863 | snrpe | A0A0F7TKR6 | A0A0F7TDQ0 | Putative Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.979 |
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