STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_06917Putative Histidine triad nucleotide binding protein. (280 aa)    
Predicted Functional Partners:
PMG11_00259
Uncharacterized protein.
    
 
 0.738
PMG11_07242
DNA ligase.
   
 
 0.677
PMG11_07726
Putative Nuclear pore complex protein SonA.
   
    0.638
PMG11_07149
Putative Translation initiation factor eIF-2B alpha subunit; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
    0.628
PMG11_10648
Putative 8-oxoguanine DNA glycosylase.
    
 
 0.597
PMG11_05610
Putative DNA lyase-like protein.
    
 
 0.588
PMG11_03403
3'-5' exonuclease domain-containing protein.
   
  
 0.579
PMG11_00803
Uncharacterized protein.
    
 
 0.574
PMG11_08211
Putative Elongation factor 3.
   
  
 0.573
tef3
Putative Elongation factor 3.
   
  
 0.573
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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