STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_06466Putative NADH-cytochrome b-5 reductase. (470 aa)    
Predicted Functional Partners:
PMG11_00265
Putative Dihydroorotate dehydrogenase.
  
 0.948
PEBR_34060
Putative Cytochrome b5; Belongs to the cytochrome b5 family.
   
0.894
GOT1
Putative Got1-like family protein.
  
 
 0.817
PMG11_02266
Putative Allantoinase.
  
 
 0.788
PMG11_07894
Putative Carbamoyl-phosphate synthase.
  
 0.783
PMG11_06655
Putative Carbamoyl-phosphate synthase.
  
 0.783
cpa1
Putative Carbamoyl-phosphate synthase arginine-specific small chain-like protein.
  
 0.783
PMG11_00234
Putative Orotate phosphoribosyltransferase.
  
 
 0.766
PMG11_06252
Zn(2)-C6 fungal-type domain-containing protein.
  
 
 0.766
PMG11_09532
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.
  
 
 0.766
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.