STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_07464Putative Aspergillus niger contig An14c0130, genomic contig. (1261 aa)    
Predicted Functional Partners:
PMG11_08576
Spindle pole body component.
    
 0.810
PMG11_06977
Spindle pole body component.
    
 0.739
PMG11_04072
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.699
PMG11_02568
Spindle pole body component.
    
 0.676
PMG11_03575
Uncharacterized protein.
    
 0.676
PMG11_03683
Spindle pole body component.
    
 0.676
PMG11_00210
Spindle pole body component.
    
 0.673
ndk1
Nucleoside diphosphate kinase.
    
 0.661
PMG11_02450
Putative EB1 homolog (Eurofung).
    
 0.653
PMG11_02799
Putative Carboxyl transferase.
   
 0.640
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.