STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_07552Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (479 aa)    
Predicted Functional Partners:
PMG11_03600
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
 
 0.999
PMG11_10012
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
 0.998
PMG11_02244
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
 
 0.978
PMG11_09447
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
 
 0.978
PMG11_02987
Uncharacterized protein.
  
 
 0.971
mtd1
Methylenetetrahydrofolate dehydrogenase [NAD(+)].
  
 
 0.969
PMG11_11361
Putative Methylenetetrahydrofolate dehydrogenase.
  
 
 0.969
PMG11_05962
Putative C1 tetrahydrofolate ligase.
  
 0.962
PMG11_05731
Dihydrolipoyl dehydrogenase.
  
 0.961
PMG11_09244
Putative Aminotransferase.
  
 
 0.958
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.