STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_06885B-block_TFIIIC domain-containing protein. (1880 aa)    
Predicted Functional Partners:
PMG11_08562
Uncharacterized protein.
    
 0.987
PMG11_00378
Uncharacterized protein.
  
 
 0.973
PMG11_02670
Uncharacterized protein.
  
 
 0.971
PMG11_08095
SANT domain-containing protein.
    
 0.913
PMG11_02334
Uncharacterized protein.
    
 0.874
PMG11_03810
Uncharacterized protein.
    
 
 0.808
PEBR_30279
C2H2 transcription factor.
    
 0.784
tbpA-2
Putative Transcription initiation factor TFIID-2.
    
 0.731
PMG11_10603
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.649
RPC10
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
  0.648
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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