STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_07890Putative Peroxisome biosynthesis protein (PAS1/Peroxin-1). (1223 aa)    
Predicted Functional Partners:
PMG11_06076
Putative Peroxisome assembly factor 2.
  
0.997
PMG11_06476
Putative Peroxin 13.
    
 0.951
PMG11_06463
Putative Peroxisomal targeting signal-1 receptor.
   
 0.945
PMG11_06851
Putative Peroxin 12.
    
 0.933
PMG11_02699
Pex14_N domain-containing protein.
    
 0.930
PMG11_03402
Putative Peroxisome biosynthesis protein (Peroxin-10).
    
 0.914
PMG11_02808
Putative Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.867
PMG11_02319
Uncharacterized protein.
    
 0.858
PMG11_03782
Putative Peroxisome biosynthesis protein (Peroxine-7).
     
 0.829
PMG11_00286
Putative Nuclear protein localization protein 4.
    
 0.827
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.