STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEBR_14819TRAF-like signal transducer. (451 aa)    
Predicted Functional Partners:
ben
Putative Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.995
PMG11_05326
ANK_REP_REGION domain-containing protein.
    
 0.994
PMG11_01127
ANK_REP_REGION domain-containing protein.
   
 0.992
PMG11_11404
ANK_REP_REGION domain-containing protein.
   
 0.992
PMG11_02563
Putative Ubiquitin.
    
 0.964
PMG11_05437
BZIP domain-containing protein.
    
 0.964
PMG11_09366
Putative Ubiquitin.
    
 0.959
PMG11_04073
Putative Nuclear protein.
    
 0.959
PMG11_00518
Putative ZYBA0S16-00628g1_1.
    
  0.955
PMG11_00517
RRN7-type domain-containing protein.
    
  0.955
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.