STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_08390Uncharacterized protein. (1002 aa)    
Predicted Functional Partners:
PMG11_08211
Putative Elongation factor 3.
    
   0.723
PMG11_03487
Uncharacterized protein.
    
  0.672
tef3
Putative Elongation factor 3.
    
   0.665
PMG11_04452
RanBD1 domain-containing protein.
    
 0.658
PMG11_02538
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.649
PMG11_09196
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.617
RPS15
Putative 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.578
ubl1
Ubiquitin-like protein 1.
   
  0.577
PMG11_01983
Putative 40S ribosomal protein S8.
   
   0.571
PEBR_16406
Putative 40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.
   
   0.571
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.