STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_07134FMN hydroxy acid dehydrogenase domain-containing protein. (370 aa)    
Predicted Functional Partners:
PMG11_09244
Putative Aminotransferase.
  
 0.934
acuE
Malate synthase; Belongs to the malate synthase family.
   
 
 0.925
PMG11_08268
Isocitrate lyase.
   
 
  0.903
PMG11_04769
Putative Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.897
PMG11_03948
Putative Hydroxyisocaproate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.897
PMG11_09989
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family.
   
 
  0.896
PMG11_06485
Putative Dihydrodipicolinate synthetase family protein; Belongs to the DapA family.
   
 
  0.893
PMG11_07956
Putative FMN-dependent dehydrogenase family protein.
  
  
 
0.888
icl1
Isocitrate lyase.
   
 
  0.883
PMG11_07069
Putative FAD dependent oxidoreductase superfamily.
   
 
  0.870
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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