Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PMG11_00206 | PMG11_03808 | A0A0F7TDK2 | A0A0F7VI83 | Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. | Putative Importin beta-1 subunit. | 0.933 |
PMG11_00206 | cut15 | A0A0F7TDK2 | A0A0F7TT76 | Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. | Importin subunit alpha; Belongs to the importin alpha family. | 0.933 |
PMG11_01508 | PMG11_03808 | A0A0F7TFF2 | A0A0F7VI83 | Uncharacterized protein. | Putative Importin beta-1 subunit. | 0.776 |
PMG11_01508 | PMG11_04445 | A0A0F7TFF2 | A0A0F7VCT0 | Uncharacterized protein. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.999 |
PMG11_01508 | PMG11_04452 | A0A0F7TFF2 | A0A0F7VG52 | Uncharacterized protein. | RanBD1 domain-containing protein. | 0.627 |
PMG11_01508 | PMG11_08121 | A0A0F7TFF2 | A0A0F7TWT5 | Uncharacterized protein. | Putative Nuclear export receptor CSE1/CAS. | 0.400 |
PMG11_01508 | cut15 | A0A0F7TFF2 | A0A0F7TT76 | Uncharacterized protein. | Importin subunit alpha; Belongs to the importin alpha family. | 0.977 |
PMG11_03189 | PMG11_03808 | A0A0F7VEW1 | A0A0F7VI83 | Putative Cap binding protein. | Putative Importin beta-1 subunit. | 0.883 |
PMG11_03189 | PMG11_04445 | A0A0F7VEW1 | A0A0F7VCT0 | Putative Cap binding protein. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.920 |
PMG11_03189 | PMG11_04452 | A0A0F7VEW1 | A0A0F7VG52 | Putative Cap binding protein. | RanBD1 domain-containing protein. | 0.984 |
PMG11_03189 | PMG11_05391 | A0A0F7VEW1 | A0A0F7VK73 | Putative Cap binding protein. | Uncharacterized protein. | 0.402 |
PMG11_03189 | cbc2 | A0A0F7VEW1 | A0A0F7TWK1 | Putative Cap binding protein. | Nuclear cap-binding protein subunit 2. | 0.999 |
PMG11_03189 | cut15 | A0A0F7VEW1 | A0A0F7TT76 | Putative Cap binding protein. | Importin subunit alpha; Belongs to the importin alpha family. | 0.944 |
PMG11_03808 | PMG11_00206 | A0A0F7VI83 | A0A0F7TDK2 | Putative Importin beta-1 subunit. | Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. | 0.933 |
PMG11_03808 | PMG11_01508 | A0A0F7VI83 | A0A0F7TFF2 | Putative Importin beta-1 subunit. | Uncharacterized protein. | 0.776 |
PMG11_03808 | PMG11_03189 | A0A0F7VI83 | A0A0F7VEW1 | Putative Importin beta-1 subunit. | Putative Cap binding protein. | 0.883 |
PMG11_03808 | PMG11_04445 | A0A0F7VI83 | A0A0F7VCT0 | Putative Importin beta-1 subunit. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.992 |
PMG11_03808 | PMG11_04452 | A0A0F7VI83 | A0A0F7VG52 | Putative Importin beta-1 subunit. | RanBD1 domain-containing protein. | 0.997 |
PMG11_03808 | PMG11_07057 | A0A0F7VI83 | A0A0F7TSJ4 | Putative Importin beta-1 subunit. | ULP_PROTEASE domain-containing protein. | 0.881 |
PMG11_03808 | PMG11_08121 | A0A0F7VI83 | A0A0F7TWT5 | Putative Importin beta-1 subunit. | Putative Nuclear export receptor CSE1/CAS. | 0.727 |
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