STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_08777Putative Function: N. crassa Hex1 is required for the assembly of the Woronin body. (459 aa)    
Predicted Functional Partners:
PMG11_00611
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.981
RPS15
Putative 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.980
PMG11_07575
Putative 60S ribosomal protein L35.
   
 
 0.980
PMG11_03676
Putative 60S ribosomal protein L5.
   
 
 0.979
PMG11_01050
Putative 60S ribosomal protein L23.
   
 
 0.977
PMG11_03047
Putative 37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.975
rps6b
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.974
PMG11_01542
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 
 0.973
PMG11_07709
Putative WD domain protein.
  
 
 0.973
PMG11_00662
Putative Ribosomal protein L16a; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.972
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.