STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_07872Putative DNA-dependent protein kinase. (474 aa)    
Predicted Functional Partners:
RPS15
Putative 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.864
PMG11_04537
Putative 40S ribosomal protein S10b.
   
 0.863
PMG11_00611
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.860
PMG11_02441
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.859
PMG11_04159
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.859
rps1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.858
rps20
Putative 40S ribosomal protein S10a.
   
  0.858
RPS8B
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.857
PMG11_04517
Putative 40S ribosomal protein S29 (Eurofung).
   
 0.854
PMG11_00574
Putative 40S ribosomal protein S19.
   
 0.847
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.