Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PMG11_01492 | PMG11_01770 | A0A0F7TJM4 | A0A0F7TI01 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.981 |
| PMG11_01492 | PMG11_05043 | A0A0F7TJM4 | A0A0F7VEN2 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | Putative RNA polymerase II subunit 3. | 0.999 |
| PMG11_01492 | PMG11_09070 | A0A0F7TJM4 | A0A0F7TUW8 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | Putative Podospora anserina S mat genomic DNA chromosome 1, supercontig 5. | 0.747 |
| PMG11_01492 | PMG11_09588 | A0A0F7TJM4 | A0A0F7TWJ6 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | Putative DNA-directed RNA polymerase subunit. | 0.999 |
| PMG11_01492 | RPB2 | A0A0F7TJM4 | A0A0F7TEC9 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| PMG11_01492 | RPB5 | A0A0F7TJM4 | A0A0F7VGX1 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | DNA-directed RNA polymerases I, II, and III subunit RPABC1. | 0.999 |
| PMG11_01492 | RPB8 | A0A0F7TJM4 | A0A0F7TSV7 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.999 |
| PMG11_01492 | RPC10 | A0A0F7TJM4 | A0A0F7VGU4 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | DNA-directed RNA polymerases I, II, and III subunit RPABC4. | 0.999 |
| PMG11_01492 | RPO26 | A0A0F7TJM4 | A0A0F7TE21 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | Putative DNA-directed RNA polymerase I, II, and III subunit Rpb6. | 0.999 |
| PMG11_01492 | rpb4 | A0A0F7TJM4 | A0A0F7TL78 | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | Putative Polymerase (RNA) II (DNA directed) polypeptide D. | 0.999 |
| PMG11_01770 | PMG11_01492 | A0A0F7TI01 | A0A0F7TJM4 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Putative DNA-directed RNA polymerases N/8 kDa subunit superfamily. | 0.981 |
| PMG11_01770 | PMG11_05043 | A0A0F7TI01 | A0A0F7VEN2 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Putative RNA polymerase II subunit 3. | 0.995 |
| PMG11_01770 | PMG11_09070 | A0A0F7TI01 | A0A0F7TUW8 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Putative Podospora anserina S mat genomic DNA chromosome 1, supercontig 5. | 0.756 |
| PMG11_01770 | PMG11_09588 | A0A0F7TI01 | A0A0F7TWJ6 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Putative DNA-directed RNA polymerase subunit. | 0.988 |
| PMG11_01770 | RPB2 | A0A0F7TI01 | A0A0F7TEC9 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
| PMG11_01770 | RPB5 | A0A0F7TI01 | A0A0F7VGX1 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | DNA-directed RNA polymerases I, II, and III subunit RPABC1. | 0.995 |
| PMG11_01770 | RPB8 | A0A0F7TI01 | A0A0F7TSV7 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.987 |
| PMG11_01770 | RPC10 | A0A0F7TI01 | A0A0F7VGU4 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | DNA-directed RNA polymerases I, II, and III subunit RPABC4. | 0.992 |
| PMG11_01770 | RPO26 | A0A0F7TI01 | A0A0F7TE21 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Putative DNA-directed RNA polymerase I, II, and III subunit Rpb6. | 0.993 |
| PMG11_01770 | rpb4 | A0A0F7TI01 | A0A0F7TL78 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Putative Polymerase (RNA) II (DNA directed) polypeptide D. | 0.995 |
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