STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_09187CHAT domain-containing protein. (198 aa)    
Predicted Functional Partners:
PMG11_05326
ANK_REP_REGION domain-containing protein.
    
 0.843
PMG11_05566
Putative ZZ type zinc finger domain containing protein.
    
 0.823
PMG11_06350
Uncharacterized protein.
    
 0.783
PMG11_10778
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.783
PMG11_01065
Putative SCF ubiquitin ligase, Rbx1 component.
    
 0.782
PMG11_10353
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.779
PMG11_04140
Putative Cullin; Belongs to the cullin family.
    
 0.779
PMG11_08889
UBA domain-containing protein.
    
 0.720
PMG11_00150
Putative Transcriptional corepressor Cyc8.
    
 0.705
PMG11_03367
Fungal_trans domain-containing protein.
    
 0.705
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.