STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubl1Ubiquitin-like protein 1. (80 aa)    
Predicted Functional Partners:
PMG11_03446
Putative Sentrin-specific cysteine protease.
    
 0.999
PMG11_04954
Putative NEDD8-activating enzyme E1 catalytic subunit.
    
 0.999
PMG11_06176
Putative NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.998
PMG11_10572
Uncharacterized protein.
    
 0.997
PMG11_01065
Putative SCF ubiquitin ligase, Rbx1 component.
   
 0.991
PMG11_08211
Putative Elongation factor 3.
    
 
 0.989
PMG11_08740
MPN domain-containing protein.
   
 0.985
PMG11_06906
Putative COP9 signalosome.
   
 0.984
PMG11_06719
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
    
 0.983
PMG11_09710
Uncharacterized protein.
    
 0.983
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.