STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_08087Zn(2)-C6 fungal-type domain-containing protein. (492 aa)    
Predicted Functional Partners:
PMG11_06086
WD_REPEATS_REGION domain-containing protein.
   
  0.550
PMG11_08396
Putative Pre-rRNA-processing protein ipi1.
    
 0.545
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.531
NUG1
Nuclear GTP-binding protein NUG1.
   
  0.479
PMG11_02259
CLP1_P domain-containing protein.
    
  0.472
PMG11_04808
Putative 60S ribosomal protein RML2, mitochondrial.
    
  0.466
PEBR_26154
Putative 40S ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
  0.459
PMG11_00305
Uncharacterized protein.
    
 0.455
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.453
RPL2
Putative 60S ribosomal protein L2.
    
  0.453
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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