STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acuEMalate synthase; Belongs to the malate synthase family. (540 aa)    
Predicted Functional Partners:
icl1
Isocitrate lyase.
 
 
 0.999
PMG11_08268
Isocitrate lyase.
 
 
 0.988
facA
Acetyl-coenzyme A synthetase.
   
 0.975
mcsA
Citrate synthase; Belongs to the citrate synthase family.
   
 0.969
citA
Citrate synthase; Belongs to the citrate synthase family.
   
 0.969
acuF
Putative Phosphoenolpyruvate carboxykinase.
   
 
 0.967
PMG11_09244
Putative Aminotransferase.
  
 
 0.958
PMG11_08335
Putative Fumarate lyase.
    
 0.954
PMG11_06542
Citrate synthase; Belongs to the citrate synthase family.
   
 0.953
PEBR_08297
Putative Acyl-CoA carboxylate CoA-transferase.
   
 
 0.952
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.