STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_09049Putative Ubiquitin carrier protein. (228 aa)    
Predicted Functional Partners:
PMG11_06976
Putative Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.988
PMG11_01065
Putative SCF ubiquitin ligase, Rbx1 component.
   
 0.982
PMG11_00518
Putative ZYBA0S16-00628g1_1.
   
 0.964
PMG11_00517
RRN7-type domain-containing protein.
   
 0.964
PMG11_02563
Putative Ubiquitin.
    
 0.958
PMG11_05160
Putative Ubiquitin-protein ligase.
    
 0.958
PMG11_05437
BZIP domain-containing protein.
    
 0.958
PMG11_04140
Putative Cullin; Belongs to the cullin family.
    
 0.953
PMG11_10353
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.948
PMG11_04479
Putative Cell division control protein.
    
 0.915
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.