STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_08605Uncharacterized protein. (501 aa)    
Predicted Functional Partners:
PMG11_10561
MSP domain-containing protein.
   
 
 0.736
HTZ1
Histone H2A; Belongs to the histone H2A family.
    
 0.723
PEBR_40714
Putative MADS box transcription factor Mcm1.
    
 0.703
PMG11_07526
Uncharacterized protein.
    
 0.693
PMG11_00104
Putative HLH transcription factor.
  
 
 
 0.684
PMG11_06450
Putative FAS1 domain-containing protein.
    
 
 0.669
PMG11_06423
Putative Sin3 protein.
    
 
 0.669
tbpA-2
Putative Transcription initiation factor TFIID-2.
    
 0.655
PMG11_05354
Uncharacterized protein.
    
  0.626
PMG11_05326
ANK_REP_REGION domain-containing protein.
    
 0.622
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.