Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PEBR_39899 | PMG11_00491 | A0A0F7TG45 | A0A0F7TCP0 | Putative UPF0662 protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.933 |
PEBR_39899 | PMG11_01513 | A0A0F7TG45 | A0A0F7TFF7 | Putative UPF0662 protein. | F-box domain-containing protein. | 0.933 |
PEBR_39899 | PMG11_06898 | A0A0F7TG45 | A0A0F7TN92 | Putative UPF0662 protein. | RRM domain-containing protein. | 0.609 |
PEBR_39899 | PMG11_08537 | A0A0F7TG45 | A0A0F7TTE6 | Putative UPF0662 protein. | Putative ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family. | 0.838 |
PEBR_39899 | PMG11_08641 | A0A0F7TG45 | A0A0F7TXG1 | Putative UPF0662 protein. | Uncharacterized protein. | 0.669 |
PEBR_39899 | tif1 | A0A0F7TG45 | A0A0F7TL64 | Putative UPF0662 protein. | Putative Translation initiation factor; Belongs to the DEAD box helicase family. | 0.941 |
PMG11_00491 | PEBR_39899 | A0A0F7TCP0 | A0A0F7TG45 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Putative UPF0662 protein. | 0.933 |
PMG11_00491 | PMG11_06898 | A0A0F7TCP0 | A0A0F7TN92 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | RRM domain-containing protein. | 0.885 |
PMG11_00491 | PMG11_08537 | A0A0F7TCP0 | A0A0F7TTE6 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Putative ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family. | 0.879 |
PMG11_00491 | PMG11_08641 | A0A0F7TCP0 | A0A0F7TXG1 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.721 |
PMG11_00491 | tif1 | A0A0F7TCP0 | A0A0F7TL64 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Putative Translation initiation factor; Belongs to the DEAD box helicase family. | 0.979 |
PMG11_00491 | tif451 | A0A0F7TCP0 | A0A0F7TGM6 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Putative Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.980 |
PMG11_01503 | PMG11_08641 | A0A0F7TI77 | A0A0F7TXG1 | Putative UVSB PI-3 kinase; Belongs to the PI3/PI4-kinase family. | Uncharacterized protein. | 0.726 |
PMG11_01513 | PEBR_39899 | A0A0F7TFF7 | A0A0F7TG45 | F-box domain-containing protein. | Putative UPF0662 protein. | 0.933 |
PMG11_01513 | PMG11_06898 | A0A0F7TFF7 | A0A0F7TN92 | F-box domain-containing protein. | RRM domain-containing protein. | 0.614 |
PMG11_01513 | PMG11_08537 | A0A0F7TFF7 | A0A0F7TTE6 | F-box domain-containing protein. | Putative ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family. | 0.836 |
PMG11_01513 | PMG11_08641 | A0A0F7TFF7 | A0A0F7TXG1 | F-box domain-containing protein. | Uncharacterized protein. | 0.711 |
PMG11_01513 | tif1 | A0A0F7TFF7 | A0A0F7TL64 | F-box domain-containing protein. | Putative Translation initiation factor; Belongs to the DEAD box helicase family. | 0.936 |
PMG11_01513 | tif451 | A0A0F7TFF7 | A0A0F7TGM6 | F-box domain-containing protein. | Putative Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.933 |
PMG11_02306 | PMG11_08641 | A0A0F7TM88 | A0A0F7TXG1 | Uncharacterized protein. | Uncharacterized protein. | 0.656 |
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