STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_10256Putative Exo-polygalacturonase; Belongs to the glycosyl hydrolase 28 family. (435 aa)    
Predicted Functional Partners:
PMG11_08439
Putative Alpha-N-arabinofuranosidase B.
     
 0.955
PMG11_07672
Putative Alpha-L-arabinofuranosidase.
     
 0.954
PMG11_01673
Alpha-L-AF_C domain-containing protein.
     
 0.913
PMG11_06526
Putative Alpha-L-arabinofuranosidase A.
     
 0.913
PMG11_08253
Putative Exopolygalacturonase X.
  
  
 
0.898
PMG11_04207
Putative Beta-xylosidase XylA.
    
 0.896
PMG11_04458
Putative Beta-glucosidase-related glycosidases.
    
 0.896
PMG11_02976
Putative Pectinesterase.
  
 
0.892
PMG11_04973
Putative Polygalacturonase.
  
 
0.890
PMG11_07613
Putative Endopolygalacturonase AN8327.
  
  
0.872
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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