STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_08712Putative WD repeat protein (AFU_orthologue AFUA_5G07060). (587 aa)    
Predicted Functional Partners:
PMG11_01975
Putative WD repeat-containing protein 5B.
   
  0.934
PMG11_00297
Putative MIF4G-like type 3.
   
 0.923
PMG11_01048
Putative Cell cycle control protein cwf14.
   
 
 0.922
PMG11_00537
Putative Pre-mRNA splicing factor ATP-dependent RNA helicase prp16.
 
  
 0.918
PMG11_02055
Putative Pre-mRNA processing splicing factor 8.
    
 
 0.898
PMG11_02962
Putative Cyclophilin-related peptidyl-prolyl cis-trans isomerase.
   
  0.889
PMG11_05072
Putative Peptidyl prolyl cis-trans isomerase Cyclophilin.
    
  0.888
PMG11_07433
Putative Cell cycle control protein.
  
 
 0.887
syf2
Putative Pre-mRNA-splicing factor syf2.
    
  0.883
PMG11_08565
Putative MRNA splicing protein Yju2.
    
  0.883
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.