PMG11_09181 protein (Penicillium brasilianum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PMG11_09181

Fe2OG dioxygenase domain-containing protein. (278 aa)

Predicted Functional Partners:

pdiA

0.837

PMG11_06547

0.544

PMG11_10934

0.544

PMG11_00342

0.444

PMG11_07270

0.444

PMG11_07834

0.444

PMG11_08719

0.443

PMG11_05575

0.441

PMG11_05863

0.441

PMG11_07144

0.441

Your Current Organism:

Penicillium brasilianum

NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PMG11_00342	PMG11_06547	A0A0F7TBQ8	A0A0F7TMB7	Putative PDI related protein A.	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	0.753
PMG11_00342	PMG11_07834	A0A0F7TBQ8	A0A0F7TVT7	Putative PDI related protein A.	Uncharacterized protein.	0.793
PMG11_00342	PMG11_09181	A0A0F7TBQ8	A0A0F7U012	Putative PDI related protein A.	Fe2OG dioxygenase domain-containing protein.	0.444
PMG11_00342	PMG11_10934	A0A0F7TBQ8	A0A0F7U412	Putative PDI related protein A.	Putative Autophagy-related protein 22-1.	0.753
PMG11_00342	pdiA	A0A0F7TBQ8	A0A0F7U2I0	Putative PDI related protein A.	Protein disulfide-isomerase.	0.959
PMG11_05575	PMG11_09181	A0A0F7TJT6	A0A0F7U012	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.441
PMG11_05863	PMG11_09181	A0A0F7TK77	A0A0F7U012	Thioredoxin; Belongs to the thioredoxin family.	Fe2OG dioxygenase domain-containing protein.	0.441
PMG11_06547	PMG11_00342	A0A0F7TMB7	A0A0F7TBQ8	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	Putative PDI related protein A.	0.753
PMG11_06547	PMG11_07270	A0A0F7TMB7	A0A0F7TPD9	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	Uncharacterized protein; Belongs to the protein disulfide isomerase family.	0.753
PMG11_06547	PMG11_07834	A0A0F7TMB7	A0A0F7TVT7	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	Uncharacterized protein.	0.753
PMG11_06547	PMG11_09181	A0A0F7TMB7	A0A0F7U012	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	Fe2OG dioxygenase domain-containing protein.	0.544
PMG11_06547	PMG11_10934	A0A0F7TMB7	A0A0F7U412	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	Putative Autophagy-related protein 22-1.	0.898
PMG11_07144	PMG11_09181	A0A0F7TSW1	A0A0F7U012	Thioredoxin domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.441
PMG11_07270	PMG11_06547	A0A0F7TPD9	A0A0F7TMB7	Uncharacterized protein; Belongs to the protein disulfide isomerase family.	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	0.753
PMG11_07270	PMG11_09181	A0A0F7TPD9	A0A0F7U012	Uncharacterized protein; Belongs to the protein disulfide isomerase family.	Fe2OG dioxygenase domain-containing protein.	0.444
PMG11_07270	PMG11_10934	A0A0F7TPD9	A0A0F7U412	Uncharacterized protein; Belongs to the protein disulfide isomerase family.	Putative Autophagy-related protein 22-1.	0.753
PMG11_07270	pdiA	A0A0F7TPD9	A0A0F7U2I0	Uncharacterized protein; Belongs to the protein disulfide isomerase family.	Protein disulfide-isomerase.	0.913
PMG11_07834	PMG11_00342	A0A0F7TVT7	A0A0F7TBQ8	Uncharacterized protein.	Putative PDI related protein A.	0.793
PMG11_07834	PMG11_06547	A0A0F7TVT7	A0A0F7TMB7	Uncharacterized protein.	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	0.753
PMG11_07834	PMG11_09181	A0A0F7TVT7	A0A0F7U012	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.444