STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_09576Putative 3-hydroxyisobutyrate dehydrogenase, mitochondrial. (339 aa)    
Predicted Functional Partners:
PMG11_07348
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.949
PMG11_09575
Putative Methylmalonate-semialdehyde dehydrogenase (Acylating).
   
 0.861
PMG11_04687
Putative ALDH-like protein.
   
 0.861
PMG11_06394
Pyr_redox_2 domain-containing protein.
   
 0.847
PMG11_02798
Uncharacterized protein.
   
 0.774
PMG11_08771
Putative 3-methylcrotonyl-CoA carboxylase subunit alpha.
   
 0.774
RPB2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.736
PMG11_09796
Putative Acyl-CoA dehydrogenase.
   
 0.722
ACADSB
Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial.
   
 0.722
echs1
Putative Enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.721
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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