STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_10867Uncharacterized protein. (357 aa)    
Predicted Functional Partners:
PMG11_03433
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.981
PMG11_03434
Uncharacterized protein.
    
 0.972
YKT6
Putative SNARE protein Ykt6; Belongs to the synaptobrevin family.
    
 
 0.875
PEBR_27655
Putative Ras-related protein Rab7.
    
 0.832
PMG11_10597
Putative GTPase Rab1/YPT1, small G protein superfamily.
    
 0.827
PMG11_05548
Uncharacterized protein.
    
 0.820
ypt5
GTP-binding protein ypt5.
    
 0.781
PMG11_01243
Uncharacterized protein.
    
 0.781
PMG11_02439
Putative RAB GTPase Vps21/Ypt51.
    
 0.781
PMG11_10114
Putative Ras-like GTP-binding protein.
    
 0.781
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.