STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_04064Putative Spermidine synthase, variant; Belongs to the spermidine/spermine synthase family. (319 aa)    
Predicted Functional Partners:
PEBR_25293
S-adenosylmethionine decarboxylase proenzyme.
    
 0.982
PMG11_01709
Putative Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 0.979
LYS3
Saccharopine dehydrogenase [NADP(+), L-glutamate-forming].
   
 0.970
PMG11_08750
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 0.958
PMG11_07388
Putative Podospora anserina S mat genomic DNA chromosome 2, supercontig 2; Belongs to the arginase family.
  
 
 0.956
PEBR_20123
Putative Arginase family protein; Belongs to the arginase family.
  
 
 0.956
PEBR_26905
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
  
 
 0.954
agaA
Arginase; Belongs to the arginase family.
  
 
 0.937
PMG11_07539
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.923
PMG11_05981
Aminotran_1_2 domain-containing protein.
   
 0.894
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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