STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_03081Zn(2)-C6 fungal-type domain-containing protein. (447 aa)    
Predicted Functional Partners:
PMG11_01638
Putative 60S ribosomal protein L7.
  
 
 0.901
PMG11_07575
Putative 60S ribosomal protein L35.
  
 
 0.898
PMG11_03676
Putative 60S ribosomal protein L5.
  
 
 0.898
RPL26B
Putative Ribosomal protein L26.
  
   0.884
PMG11_01050
Putative 60S ribosomal protein L23.
  
 
 0.884
PMG11_00611
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.874
RPS15
Putative 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.842
PMG11_03947
Putative 60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.835
PMG11_02307
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.819
PMG11_07748
Putative 60S ribosomal protein.
  
 
 0.818
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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