STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_04885Putative 12-oxophytodienoate reductase. (408 aa)    
Predicted Functional Partners:
PMG11_05012
Phenylalanine ammonia-lyase.
     
 0.717
PMG11_08921
Putative 2Fe-2S iron-sulfur cluster binding domain protein.
    
 0.563
PMG11_08744
Putative Electron transfer flavoprotein, beta subunit.
  
 
 0.530
PMG11_01946
Uncharacterized protein.
     
 0.520
TRR1
Thioredoxin reductase.
  
 
 0.507
PMG11_08250
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.474
PEBR_32955
Putative electron transfer flavoprotein subunit alpha, mitochondrial.
   
 
 0.467
PMG11_00279
AMP-binding domain-containing protein.
  
 
  0.447
PMG11_05946
Putative Acetoacetyl-CoA synthase.
  
 
  0.447
PMG11_09689
Putative VrtB.
  
 
  0.447
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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