STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_04951Putative V-SNARE. (422 aa)    
Predicted Functional Partners:
PMG11_08259
Putative Synaptobrevin.
   
 0.996
PMG11_01310
t-SNARE coiled-coil homology domain-containing protein.
   
 0.995
PMG11_07449
Putative Aspergillus niger contig An14c0130, genomic contig; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.981
PMG11_08052
Putative Syntaxin; Belongs to the syntaxin family.
    
 0.980
PMG11_05084
Putative Vesicular-fusion protein sec17.
    
 
 0.978
PMG11_06658
Putative Synaptobrevin/VAMP-like protein; Belongs to the synaptobrevin family.
    
 0.972
PMG11_02539
Lgl_C domain-containing protein.
    
 
 0.946
sec22
Protein transport protein sec22; Belongs to the synaptobrevin family.
    
 
 0.942
PMG11_02522
Putative NsfA.
   
 
 0.940
PMG11_05236
RRM domain-containing protein.
    
 0.931
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.