STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEY1Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. (881 aa)    
Predicted Functional Partners:
PMG11_08761
Protein YOP1.
    
 
 0.898
PMG11_01082
Uncharacterized protein.
    
   0.888
PMG11_04398
Reticulon-like protein.
    
 
 0.777
PMG11_11167
Uncharacterized protein.
    
 
 0.759
PMG11_00633
Uncharacterized protein.
    
   0.755
PMG11_10160
Zinc_ribbon_10 domain-containing protein.
    
 
 0.645
PMG11_07935
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.630
PMG11_10668
Putative Endoplasmic reticulum protein.
    
 
 0.626
GOT1
Putative Got1-like family protein.
    
   0.608
PMG11_02398
Uncharacterized protein.
    
 
 0.597
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
Server load: low (20%) [HD]