STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_04632Uncharacterized protein. (808 aa)    
Predicted Functional Partners:
PMG11_10713
Putative APSES transcription factor.
    
 0.843
rvb1
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.798
PMG11_10939
Putative ARP4; Belongs to the actin family.
   
 0.789
PMG11_06113
Putative ANK-repeat protein MBP1.
    
 0.779
PMG11_06866
Uncharacterized protein.
   
 0.779
PMG11_10143
Putative Chromatin remodeling complex subunit Arp5; Belongs to the actin family.
    
 0.779
ben
Putative Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.770
PMG11_04800
Putative Ubiquitin conjugating enzyme.
    
 0.759
PEBR_35417
Putative Chromatin-remodeling complex subunit ies6.
    
 0.749
PMG11_05772
Uncharacterized protein.
   
 0.722
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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