STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_04593Uncharacterized protein. (515 aa)    
Predicted Functional Partners:
PMG11_06892
4HBT domain-containing protein.
   
 0.724
PMG11_05503
PKS_AT domain-containing protein.
  
 0.708
PMG11_09595
ACPS domain-containing protein.
   
 0.699
PMG11_00694
Putative Acyl carrier protein.
    
 0.607
PMG11_06291
Putative Short chain dehydrogenase.
    
 0.601
PMG11_09609
Putative Acetyl-CoA carboxylase.
   
 
 0.599
PMG11_07368
Putative Non-ribosomal peptide synthetase/alpha-aminoadipate reductase.
   
 0.576
PMG11_04893
Putative L-aminoadipate-semialdehyde dehydrogenase large subunit.
   
 0.576
PMG11_03954
Carrier domain-containing protein.
   
 0.576
PEBR_18610
Uncharacterized protein.
   
 0.573
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.