STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_04622SpoU_sub_bind domain-containing protein. (519 aa)    
Predicted Functional Partners:
PMG11_03130
Uncharacterized protein.
   
 
 0.941
PMG11_04480
EngB-type G domain-containing protein.
  
 
 0.935
PMG11_00249
Putative 54S ribosomal protein L4, mitochondrial.
   
 
 0.932
PMG11_04187
TRUD domain-containing protein.
   
   0.924
PMG11_07795
Putative 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.923
PMG11_05030
Putative Cytidine and deoxycytidylate deaminase zinc-binding domain protein.
  
 
 0.920
RPL26B
Putative Ribosomal protein L26.
  
   0.914
PMG11_00694
Putative Acyl carrier protein.
    
 
 0.914
PMG11_00149
Putative 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.914
PMG11_05485
Putative 50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.914
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.