Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED10 | PMG11_00045 | A0A0F7TFQ8 | A0A0F7TDU9 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.999 |
MED10 | PMG11_04654 | A0A0F7TFQ8 | A0A0F7VIC3 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.545 |
PMG11_00045 | MED10 | A0A0F7TDU9 | A0A0F7TFQ8 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.999 |
PMG11_00045 | PMG11_04654 | A0A0F7TDU9 | A0A0F7VIC3 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Uncharacterized protein. | 0.545 |
PMG11_00286 | PMG11_00292 | A0A0F7TC97 | A0A0F7TDU8 | Putative Nuclear protein localization protein 4. | Putative DEAD-box like helicase. | 0.918 |
PMG11_00286 | PMG11_04654 | A0A0F7TC97 | A0A0F7VIC3 | Putative Nuclear protein localization protein 4. | Uncharacterized protein. | 0.571 |
PMG11_00286 | PMG11_05447 | A0A0F7TC97 | A0A0F7VI86 | Putative Nuclear protein localization protein 4. | Putative Mating-type switching protein swi10. | 0.956 |
PMG11_00286 | PMG11_08342 | A0A0F7TC97 | A0A0F7TWE4 | Putative Nuclear protein localization protein 4. | Putative DNA repair protein RAD1. | 0.948 |
PMG11_00292 | PMG11_00286 | A0A0F7TDU8 | A0A0F7TC97 | Putative DEAD-box like helicase. | Putative Nuclear protein localization protein 4. | 0.918 |
PMG11_00292 | PMG11_04654 | A0A0F7TDU8 | A0A0F7VIC3 | Putative DEAD-box like helicase. | Uncharacterized protein. | 0.548 |
PMG11_00292 | PMG11_05031 | A0A0F7TDU8 | A0A0F7VJV5 | Putative DEAD-box like helicase. | Stn1 domain-containing protein. | 0.785 |
PMG11_00292 | PMG11_05447 | A0A0F7TDU8 | A0A0F7VI86 | Putative DEAD-box like helicase. | Putative Mating-type switching protein swi10. | 0.951 |
PMG11_00292 | PMG11_06674 | A0A0F7TDU8 | A0A0F7TSM4 | Putative DEAD-box like helicase. | Putative Possible replication factor-a protein. | 0.785 |
PMG11_00292 | PMG11_08342 | A0A0F7TDU8 | A0A0F7TWE4 | Putative DEAD-box like helicase. | Putative DNA repair protein RAD1. | 0.906 |
PMG11_00292 | PMG11_10917 | A0A0F7TDU8 | A0A0F7U0K5 | Putative DEAD-box like helicase. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.974 |
PMG11_04654 | MED10 | A0A0F7VIC3 | A0A0F7TFQ8 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.545 |
PMG11_04654 | PMG11_00045 | A0A0F7VIC3 | A0A0F7TDU9 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.545 |
PMG11_04654 | PMG11_00286 | A0A0F7VIC3 | A0A0F7TC97 | Uncharacterized protein. | Putative Nuclear protein localization protein 4. | 0.571 |
PMG11_04654 | PMG11_00292 | A0A0F7VIC3 | A0A0F7TDU8 | Uncharacterized protein. | Putative DEAD-box like helicase. | 0.548 |
PMG11_04654 | PMG11_05031 | A0A0F7VIC3 | A0A0F7VJV5 | Uncharacterized protein. | Stn1 domain-containing protein. | 0.566 |
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