Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdd | DeoD | SAMN05444344_2926 | SAMN05444344_2771 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Purine-nucleoside phosphorylase. | 0.925 |
Cdd | SHF66904.1 | SAMN05444344_2926 | SAMN05444344_1093 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uracil phosphoribosyltransferase. | 0.406 |
Cdd | SHF72633.1 | SAMN05444344_2926 | SAMN05444344_1391 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.953 |
Cdd | SHF95673.1 | SAMN05444344_2926 | SAMN05444344_2148 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uridine phosphorylase. | 0.978 |
Cdd | SHG15325.1 | SAMN05444344_2926 | SAMN05444344_2914 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uridine kinase. | 0.918 |
Cdd | surE | SAMN05444344_2926 | SAMN05444344_2691 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.908 |
Cdd | tdk | SAMN05444344_2926 | SAMN05444344_0975 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Thymidine kinase. | 0.933 |
DeoD | Cdd | SAMN05444344_2771 | SAMN05444344_2926 | Purine-nucleoside phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.925 |
DeoD | PyrR | SAMN05444344_2771 | SAMN05444344_1823 | Purine-nucleoside phosphorylase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.900 |
DeoD | SHF66904.1 | SAMN05444344_2771 | SAMN05444344_1093 | Purine-nucleoside phosphorylase. | Uracil phosphoribosyltransferase. | 0.908 |
DeoD | SHF72633.1 | SAMN05444344_2771 | SAMN05444344_1391 | Purine-nucleoside phosphorylase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.921 |
DeoD | SHF95673.1 | SAMN05444344_2771 | SAMN05444344_2148 | Purine-nucleoside phosphorylase. | Uridine phosphorylase. | 0.941 |
DeoD | SHG02503.1 | SAMN05444344_2771 | SAMN05444344_2421 | Purine-nucleoside phosphorylase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.900 |
DeoD | surE | SAMN05444344_2771 | SAMN05444344_2691 | Purine-nucleoside phosphorylase. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.900 |
DeoD | tdk | SAMN05444344_2771 | SAMN05444344_0975 | Purine-nucleoside phosphorylase. | Thymidine kinase. | 0.919 |
PyrR | DeoD | SAMN05444344_1823 | SAMN05444344_2771 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Purine-nucleoside phosphorylase. | 0.900 |
PyrR | SHF66904.1 | SAMN05444344_1823 | SAMN05444344_1093 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Uracil phosphoribosyltransferase. | 0.911 |
PyrR | SHF72633.1 | SAMN05444344_1823 | SAMN05444344_1391 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.900 |
PyrR | SHF95673.1 | SAMN05444344_1823 | SAMN05444344_2148 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Uridine phosphorylase. | 0.900 |
PyrR | SHG02503.1 | SAMN05444344_1823 | SAMN05444344_2421 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.976 |
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