STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF96173.1Thiosulfate/3-mercaptopyruvate sulfurtransferase. (278 aa)    
Predicted Functional Partners:
SHF49138.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
 0.932
SHF88528.1
Cysteine desulfurase.
  
 0.929
SHF85052.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.928
SHF71946.1
Cystathionine beta-lyase.
 
 
 0.916
SHF85135.1
Phosphoadenylylsulfate reductase (thioredoxin).
    
 0.915
SHF74625.1
Aspartate aminotransferase.
     
 0.905
SHF85753.1
Aspartate aminotransferase.
     
 0.905
SHF50245.1
Thiosulfate dehydrogenase [quinone] large subunit.
  
 
  0.901
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.826
SHF96194.1
Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
     
 0.796
Your Current Organism:
Tenacibaculum mesophilum
NCBI taxonomy Id: 104268
Other names: CIP 107215, DSM 13764, IFO 16307, NBRC 16307, T. mesophilum, Tenacibaculum mesophilum Suzuki et al. 2001
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