Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF69332.1 | SHG06651.1 | SAMN05444344_1227 | SAMN05444344_2560 | Hypothetical protein. | Hypothetical protein. | 0.524 |
SHF69332.1 | SHG06674.1 | SAMN05444344_1227 | SAMN05444344_2561 | Hypothetical protein. | Hypothetical protein. | 0.475 |
SHF69332.1 | SHG06691.1 | SAMN05444344_1227 | SAMN05444344_2562 | Hypothetical protein. | Hypothetical protein. | 0.558 |
SHF86446.1 | SHG06610.1 | SAMN05444344_1761 | SAMN05444344_2558 | Hypothetical protein. | Signal transduction histidine kinase. | 0.425 |
SHF86446.1 | SHG06651.1 | SAMN05444344_1761 | SAMN05444344_2560 | Hypothetical protein. | Hypothetical protein. | 0.608 |
SHF86446.1 | SHG06674.1 | SAMN05444344_1761 | SAMN05444344_2561 | Hypothetical protein. | Hypothetical protein. | 0.717 |
SHF86446.1 | SHG06691.1 | SAMN05444344_1761 | SAMN05444344_2562 | Hypothetical protein. | Hypothetical protein. | 0.689 |
SHF86446.1 | SHG19192.1 | SAMN05444344_1761 | SAMN05444344_3062 | Hypothetical protein. | Ligand-binding sensor domain-containing protein. | 0.400 |
SHG06610.1 | SHF86446.1 | SAMN05444344_2558 | SAMN05444344_1761 | Signal transduction histidine kinase. | Hypothetical protein. | 0.425 |
SHG06610.1 | SHG06636.1 | SAMN05444344_2558 | SAMN05444344_2559 | Signal transduction histidine kinase. | Two-component system, NtrC family, response regulator HydG. | 0.510 |
SHG06610.1 | SHG06651.1 | SAMN05444344_2558 | SAMN05444344_2560 | Signal transduction histidine kinase. | Hypothetical protein. | 0.739 |
SHG06610.1 | SHG06674.1 | SAMN05444344_2558 | SAMN05444344_2561 | Signal transduction histidine kinase. | Hypothetical protein. | 0.745 |
SHG06610.1 | SHG06691.1 | SAMN05444344_2558 | SAMN05444344_2562 | Signal transduction histidine kinase. | Hypothetical protein. | 0.741 |
SHG06610.1 | SHG19192.1 | SAMN05444344_2558 | SAMN05444344_3062 | Signal transduction histidine kinase. | Ligand-binding sensor domain-containing protein. | 0.441 |
SHG06636.1 | SHG06610.1 | SAMN05444344_2559 | SAMN05444344_2558 | Two-component system, NtrC family, response regulator HydG. | Signal transduction histidine kinase. | 0.510 |
SHG06636.1 | SHG06651.1 | SAMN05444344_2559 | SAMN05444344_2560 | Two-component system, NtrC family, response regulator HydG. | Hypothetical protein. | 0.597 |
SHG06636.1 | SHG06674.1 | SAMN05444344_2559 | SAMN05444344_2561 | Two-component system, NtrC family, response regulator HydG. | Hypothetical protein. | 0.512 |
SHG06636.1 | SHG06691.1 | SAMN05444344_2559 | SAMN05444344_2562 | Two-component system, NtrC family, response regulator HydG. | Hypothetical protein. | 0.444 |
SHG06651.1 | SHF69332.1 | SAMN05444344_2560 | SAMN05444344_1227 | Hypothetical protein. | Hypothetical protein. | 0.524 |
SHG06651.1 | SHF86446.1 | SAMN05444344_2560 | SAMN05444344_1761 | Hypothetical protein. | Hypothetical protein. | 0.608 |
page 1 of 3