Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CydB | SHG07474.1 | SAMN05444344_2601 | SAMN05444344_2602 | Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein. | Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. | 0.999 |
CydB | SHG07512.1 | SAMN05444344_2601 | SAMN05444344_2604 | Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein. | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | 0.506 |
CydB | TrxA-3 | SAMN05444344_2601 | SAMN05444344_2603 | Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein. | Thioredoxin. | 0.565 |
SHG07474.1 | CydB | SAMN05444344_2602 | SAMN05444344_2601 | Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. | Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein. | 0.999 |
SHG07474.1 | SHG07512.1 | SAMN05444344_2602 | SAMN05444344_2604 | Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | 0.508 |
SHG07474.1 | TrxA-3 | SAMN05444344_2602 | SAMN05444344_2603 | Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. | Thioredoxin. | 0.565 |
SHG07512.1 | CydB | SAMN05444344_2604 | SAMN05444344_2601 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein. | 0.506 |
SHG07512.1 | SHG07474.1 | SAMN05444344_2604 | SAMN05444344_2602 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. | 0.508 |
SHG07512.1 | SHG07531.1 | SAMN05444344_2604 | SAMN05444344_2605 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | CBS domain-containing protein. | 0.527 |
SHG07512.1 | TrxA-3 | SAMN05444344_2604 | SAMN05444344_2603 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | Thioredoxin. | 0.598 |
SHG07531.1 | SHG07512.1 | SAMN05444344_2605 | SAMN05444344_2604 | CBS domain-containing protein. | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | 0.527 |
SHG07531.1 | TrxA-3 | SAMN05444344_2605 | SAMN05444344_2603 | CBS domain-containing protein. | Thioredoxin. | 0.417 |
TrxA-3 | CydB | SAMN05444344_2603 | SAMN05444344_2601 | Thioredoxin. | Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein. | 0.565 |
TrxA-3 | SHG07474.1 | SAMN05444344_2603 | SAMN05444344_2602 | Thioredoxin. | Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. | 0.565 |
TrxA-3 | SHG07512.1 | SAMN05444344_2603 | SAMN05444344_2604 | Thioredoxin. | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | 0.598 |
TrxA-3 | SHG07531.1 | SAMN05444344_2603 | SAMN05444344_2605 | Thioredoxin. | CBS domain-containing protein. | 0.417 |