STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001641405_00305Unannotated protein. (588 aa)    
Predicted Functional Partners:
GCA_001641405_01127
Unannotated protein.
  
  
 
0.938
GCA_001641405_03178
Unannotated protein.
  
  0.848
GCA_001641405_00306
Unannotated protein.
 
     0.831
GCA_001641405_02763
Unannotated protein.
  
 0.785
GCA_001641405_03790
Unannotated protein.
   
 
0.734
GCA_001641405_03772
Unannotated protein.
   
 0.695
GCA_001641405_02261
Unannotated protein.
    
  0.689
GCA_001641405_02268
Unannotated protein.
  
  0.687
GCA_001641405_02368
Unannotated protein.
  
  0.681
GCA_001641405_02732
Unannotated protein.
  
  
 
0.679
Your Current Organism:
Tenacibaculum ovolyticum
NCBI taxonomy Id: 104270
Other names: ATCC 51887, CCUG 35199, CIP 106403, DSM 18103, Flexibacter ovolyticus, Haerentibaculum ovolyticus, IFO 15947, JCM 21158, LMG 13026, LMG:13026, NBRC 15947, NCIMB 13127, T. ovolyticum, strain EKD 002, strain EKD002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.