STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001641405_00397Unannotated protein. (934 aa)    
Predicted Functional Partners:
GCA_001641405_00747
Unannotated protein.
    
  0.903
GCA_001641405_00748
Unannotated protein.
    
  0.903
GCA_001641405_01960
Unannotated protein.
   
 0.851
GCA_001641405_02358
Unannotated protein.
    
  0.818
GCA_001641405_02430
Unannotated protein.
    
  0.818
GCA_001641405_02431
Unannotated protein.
    
  0.818
GCA_001641405_01531
Unannotated protein.
   
 0.813
GCA_001641405_01961
Unannotated protein.
   
 0.813
GCA_001641405_02416
Unannotated protein.
   
   0.748
GCA_001641405_01235
Unannotated protein.
    
  0.743
Your Current Organism:
Tenacibaculum ovolyticum
NCBI taxonomy Id: 104270
Other names: ATCC 51887, CCUG 35199, CIP 106403, DSM 18103, Flexibacter ovolyticus, Haerentibaculum ovolyticus, IFO 15947, JCM 21158, LMG 13026, LMG:13026, NBRC 15947, NCIMB 13127, T. ovolyticum, strain EKD 002, strain EKD002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.