STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001641405_02393Unannotated protein. (264 aa)    
Predicted Functional Partners:
GCA_001641405_02606
Unannotated protein.
    
  0.716
GCA_001641405_02416
Unannotated protein.
 
 
 0.673
GCA_001641405_02800
Unannotated protein.
  
 
  0.628
GCA_001641405_03418
Unannotated protein.
 
  
  0.619
GCA_001641405_02394
Unannotated protein.
 
    0.608
GCA_001641405_01991
Unannotated protein.
   
 
 0.601
GCA_001641405_02550
Unannotated protein.
  
 
  0.597
GCA_001641405_01300
Unannotated protein.
  
 
 
0.589
GCA_001641405_02701
Unannotated protein.
     
 0.589
GCA_001641405_00665
Unannotated protein.
  
 
  0.571
Your Current Organism:
Tenacibaculum ovolyticum
NCBI taxonomy Id: 104270
Other names: ATCC 51887, CCUG 35199, CIP 106403, DSM 18103, Flexibacter ovolyticus, Haerentibaculum ovolyticus, IFO 15947, JCM 21158, LMG 13026, LMG:13026, NBRC 15947, NCIMB 13127, T. ovolyticum, strain EKD 002, strain EKD002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.