STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001641405_03027Unannotated protein. (2128 aa)    
Predicted Functional Partners:
GCA_001641405_03611
Unannotated protein.
  
 
 0.879
GCA_001641405_03412
Unannotated protein.
    
 0.762
GCA_001641405_03026
Unannotated protein.
       0.752
GCA_001641405_02529
Unannotated protein.
  
 
 0.711
GCA_001641405_01418
Unannotated protein.
  
 
 0.701
GCA_001641405_00757
Unannotated protein.
    
  0.670
GCA_001641405_00844
Unannotated protein.
  
 
 0.609
GCA_001641405_01775
Unannotated protein.
  
 
 0.609
GCA_001641405_01776
Unannotated protein.
  
 
 0.609
GCA_001641405_01777
Unannotated protein.
  
 
 0.609
Your Current Organism:
Tenacibaculum ovolyticum
NCBI taxonomy Id: 104270
Other names: ATCC 51887, CCUG 35199, CIP 106403, DSM 18103, Flexibacter ovolyticus, Haerentibaculum ovolyticus, IFO 15947, JCM 21158, LMG 13026, LMG:13026, NBRC 15947, NCIMB 13127, T. ovolyticum, strain EKD 002, strain EKD002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.