STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001641405_03341Unannotated protein. (267 aa)    
Predicted Functional Partners:
GCA_001641405_03342
Unannotated protein.
 
     0.953
GCA_001641405_00911
Unannotated protein.
  
 0.922
GCA_001641405_01626
Unannotated protein.
  
 0.878
GCA_001641405_01615
Unannotated protein.
  
 0.866
GCA_001641405_00916
Unannotated protein.
  
 
 0.782
GCA_001641405_03343
Unannotated protein.
       0.773
GCA_001641405_03346
Unannotated protein.
 
 
   0.771
GCA_001641405_03710
Unannotated protein.
 
     0.742
GCA_001641405_03706
Unannotated protein.
  
    0.739
GCA_001641405_03703
Unannotated protein.
  
     0.732
Your Current Organism:
Tenacibaculum ovolyticum
NCBI taxonomy Id: 104270
Other names: ATCC 51887, CCUG 35199, CIP 106403, DSM 18103, Flexibacter ovolyticus, Haerentibaculum ovolyticus, IFO 15947, JCM 21158, LMG 13026, LMG:13026, NBRC 15947, NCIMB 13127, T. ovolyticum, strain EKD 002, strain EKD002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.