STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074X2L7Pre-mRNA-splicing factor clf1. (675 aa)    
Predicted Functional Partners:
A0A074XLD9
Pre-mRNA-processing protein 45.
  
 0.999
A0A074XR87
Pre-mRNA-splicing factor syf1.
   
0.999
A0A074XSY1
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
 0.999
A0A074XTY4
RRM domain-containing protein.
   
 0.999
A0A074Y0Y9
Isy1-like splicing factor.
   
 0.999
A0A074YRT6
G10 protein.
    
 0.999
A0A074X3W7
Peptidyl prolyl cis-trans isomerase cyclophilin.
   
 0.998
A0A074XIH8
SYF2-domain-containing protein.
    
 0.998
A0A074XG50
Cell cycle control protein.
   
 0.994
A0A074Y4D6
Uncharacterized protein.
   
 
 0.994
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.