STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074X4B6Putative pectate lyase. (321 aa)    
Predicted Functional Partners:
A0A074XQP0
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
   
 0.892
A0A074XIV9
Pectate lyase.
  
  
 0.886
A0A074X7P1
Pectate lyase-like protein.
  
  
  0.853
A0A074X2I1
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
   
 
 0.835
A0A074Y0M5
Polysaccharide lyase family 1 protein.
  
  
 
0.825
A0A074X8N5
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
   
 
 0.810
A0A074XX36
Alpha-galactosidase; Hydrolyzes a variety of simple alpha-D-galactoside as well as more complex molecules such as oligosaccharides and polysaccharides. Belongs to the glycosyl hydrolase.
 
   
  0.797
A0A074YRK4
RING/U-box.
    
 0.786
A0A074XE41
Glycoside hydrolase.
     
 0.721
A0A074YM95
Endo-polygalacturonase D.
     
 0.721
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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